STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABB34522.1Ribulose-bisphosphate carboxylase. (113 aa)    
Predicted Functional Partners:
cbbL
Ribulose-bisphosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily.
 
 0.999
ABB35607.1
Phosphoribulokinase.
 
 
 0.977
pgk
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 0.916
ABB34241.1
HAD-superfamily hydrolase subfamily IA, variant 3.
    
 0.909
ABB35075.1
Conserved hypothetical protein.
     
  0.900
ABB34524.1
Putative carboxysome shell polypeptide CsoS3.
 
   
 0.889
ABB34526.1
Putative carboxysome peptide B.
 
 
 
 0.887
ABB34525.1
Putative carboxysome peptide A.
 
 
 
 0.884
ABB34523.1
Putative carboxysome structural peptide CsoS2.
 
   
 0.880
ABB34520.1
Carboxysome shell peptide, CsoS1.
   
 
 0.813
Your Current Organism:
Synechococcus sp. CC9605
NCBI taxonomy Id: 110662
Other names: S. sp. CC9605
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