node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABB34031.1 | ABB34913.1 | Syncc9605_0255 | Syncc9605_1158 | Competence-damaged protein; Belongs to the CinA family. | DNA polymerase III, alpha subunit. | 0.406 |
ABB34031.1 | gyrA | Syncc9605_0255 | Syncc9605_1942 | Competence-damaged protein; Belongs to the CinA family. | DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.493 |
ABB34031.1 | gyrB | Syncc9605_0255 | Syncc9605_0087 | Competence-damaged protein; Belongs to the CinA family. | DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.509 |
ABB34031.1 | recA | Syncc9605_0255 | Syncc9605_0381 | Competence-damaged protein; Belongs to the CinA family. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.700 |
ABB34031.1 | secA | Syncc9605_0255 | Syncc9605_0081 | Competence-damaged protein; Belongs to the CinA family. | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. | 0.500 |
ABB34473.1 | gyrA | Syncc9605_0699 | Syncc9605_1942 | Peptidase S26A, signal peptidase I; Belongs to the peptidase S26 family. | DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.674 |
ABB34473.1 | recA | Syncc9605_0699 | Syncc9605_0381 | Peptidase S26A, signal peptidase I; Belongs to the peptidase S26 family. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.466 |
ABB34473.1 | secA | Syncc9605_0699 | Syncc9605_0081 | Peptidase S26A, signal peptidase I; Belongs to the peptidase S26 family. | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. | 0.432 |
ABB34913.1 | ABB34031.1 | Syncc9605_1158 | Syncc9605_0255 | DNA polymerase III, alpha subunit. | Competence-damaged protein; Belongs to the CinA family. | 0.406 |
ABB34913.1 | gyrA | Syncc9605_1158 | Syncc9605_1942 | DNA polymerase III, alpha subunit. | DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.512 |
ABB34913.1 | pheT | Syncc9605_1158 | Syncc9605_1339 | DNA polymerase III, alpha subunit. | phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.514 |
ABB34913.1 | recA | Syncc9605_1158 | Syncc9605_0381 | DNA polymerase III, alpha subunit. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.439 |
ABB34913.1 | secA | Syncc9605_1158 | Syncc9605_0081 | DNA polymerase III, alpha subunit. | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. | 0.557 |
ABB34913.1 | topA | Syncc9605_1158 | Syncc9605_0597 | DNA polymerase III, alpha subunit. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.493 |
ABB35682.1 | ABB35684.1 | Syncc9605_1941 | Syncc9605_1943 | Lycopene cyclase, beta and epsilon. | Conserved hypothetical protein. | 0.616 |
ABB35682.1 | gyrA | Syncc9605_1941 | Syncc9605_1942 | Lycopene cyclase, beta and epsilon. | DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.773 |
ABB35684.1 | ABB35682.1 | Syncc9605_1943 | Syncc9605_1941 | Conserved hypothetical protein. | Lycopene cyclase, beta and epsilon. | 0.616 |
ABB35684.1 | gyrA | Syncc9605_1943 | Syncc9605_1942 | Conserved hypothetical protein. | DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.552 |
gyrA | ABB34031.1 | Syncc9605_1942 | Syncc9605_0255 | DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | Competence-damaged protein; Belongs to the CinA family. | 0.493 |
gyrA | ABB34473.1 | Syncc9605_1942 | Syncc9605_0699 | DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | Peptidase S26A, signal peptidase I; Belongs to the peptidase S26 family. | 0.674 |