Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABB34474.1 | carA | Syncc9605_0700 | Syncc9605_1152 | Putative dihydroorotase. | Carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family. | 0.956 |
ABB34474.1 | carB | Syncc9605_0700 | Syncc9605_1819 | Putative dihydroorotase. | Carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family. | 0.957 |
ABB34474.1 | pyrD | Syncc9605_0700 | Syncc9605_2465 | Putative dihydroorotase. | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.995 |
ABB34474.1 | pyrE | Syncc9605_0700 | Syncc9605_0231 | Putative dihydroorotase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.946 |
ABB34474.1 | pyrF | Syncc9605_0700 | Syncc9605_2100 | Putative dihydroorotase. | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.957 |
ABB34474.1 | pyrR | Syncc9605_0700 | Syncc9605_2163 | Putative dihydroorotase. | Possible pyrimidine operon regulatory protein PyrR/uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant. | 0.982 |
ABB35017.1 | ABB35243.1 | Syncc9605_1262 | Syncc9605_1493 | Putative uracil phosphoribosyltransferase. | Possible phosphoribulokinase/uridine kinase family protein. | 0.979 |
ABB35017.1 | carA | Syncc9605_1262 | Syncc9605_1152 | Putative uracil phosphoribosyltransferase. | Carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family. | 0.493 |
ABB35017.1 | carB | Syncc9605_1262 | Syncc9605_1819 | Putative uracil phosphoribosyltransferase. | Carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family. | 0.473 |
ABB35017.1 | pyrF | Syncc9605_1262 | Syncc9605_2100 | Putative uracil phosphoribosyltransferase. | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.935 |
ABB35017.1 | pyrH | Syncc9605_1262 | Syncc9605_0711 | Putative uracil phosphoribosyltransferase. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.961 |
ABB35017.1 | pyrR | Syncc9605_1262 | Syncc9605_2163 | Putative uracil phosphoribosyltransferase. | Possible pyrimidine operon regulatory protein PyrR/uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant. | 0.924 |
ABB35017.1 | surE | Syncc9605_1262 | Syncc9605_0899 | Putative uracil phosphoribosyltransferase. | Stationary-phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.908 |
ABB35243.1 | ABB35017.1 | Syncc9605_1493 | Syncc9605_1262 | Possible phosphoribulokinase/uridine kinase family protein. | Putative uracil phosphoribosyltransferase. | 0.979 |
ABB35243.1 | pyrF | Syncc9605_1493 | Syncc9605_2100 | Possible phosphoribulokinase/uridine kinase family protein. | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.914 |
ABB35243.1 | pyrH | Syncc9605_1493 | Syncc9605_0711 | Possible phosphoribulokinase/uridine kinase family protein. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.932 |
ABB35243.1 | pyrR | Syncc9605_1493 | Syncc9605_2163 | Possible phosphoribulokinase/uridine kinase family protein. | Possible pyrimidine operon regulatory protein PyrR/uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant. | 0.919 |
ABB35243.1 | surE | Syncc9605_1493 | Syncc9605_0899 | Possible phosphoribulokinase/uridine kinase family protein. | Stationary-phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.906 |
carA | ABB34474.1 | Syncc9605_1152 | Syncc9605_0700 | Carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family. | Putative dihydroorotase. | 0.956 |
carA | ABB35017.1 | Syncc9605_1152 | Syncc9605_1262 | Carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family. | Putative uracil phosphoribosyltransferase. | 0.493 |
page 1 of 4