STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc12g09860Pc12g09860 protein; Belongs to the protein kinase superfamily. (322 aa)    
Predicted Functional Partners:
Pc22g09890
Pc22g09890 protein.
   
 0.994
Pc13g05240
Pc13g05240 protein.
  
0.993
Pc21g04330
Cell division control protein; Belongs to the CDC6/cdc18 family.
   
 0.993
Pc22g10290
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
   
 0.992
Pc22g05300
Pc22g05300 protein; Belongs to the cyclin family.
   
 0.990
Pc20g00180
Pc20g00180 protein.
    
 0.968
Pc13g09500
Pc13g09500 protein.
    
 0.931
Pc22g15950
Pc22g15950 protein.
   
 0.902
Pc20g10270
Pc20g10270 protein.
  
  
 
0.901
Pc21g01910
Pc21g01910 protein; Belongs to the cyclin family.
   
 0.900
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.