STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc13g04480Pc13g04480 protein. (421 aa)    
Predicted Functional Partners:
Pc12g10670
Pc12g10670 protein; Belongs to the heat shock protein 70 family.
 
 0.943
Pc20g08540
Pc20g08540 protein.
    
0.909
Pc06g00710
Pc06g00710 protein.
 
 0.807
Pc22g19990
Pc22g19990 protein; Belongs to the heat shock protein 70 family.
 
 0.765
Pc13g12990
Pc13g12990 protein.
 
 0.750
Pc22g10220
Pc22g10220 protein; Belongs to the heat shock protein 70 family.
 
 0.739
Pc22g11240
Pc22g11240 protein; Belongs to the heat shock protein 70 family.
 
 0.731
Pc12g16290
Pc12g16290 protein; Belongs to the heat shock protein 70 family.
 
 0.716
Pc12g05640
Pc12g05640 protein.
  
 0.686
Pc22g02750
Pc22g02750 protein.
  
 0.686
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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