STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc16g08330Pc16g08330 protein; Belongs to the cytochrome P450 family. (531 aa)    
Predicted Functional Partners:
Pc13g12750
Pc13g12750 protein.
   
 0.974
Pc20g13170
Pc20g13170 protein.
   
 0.974
Pc22g11560
Pc22g11560 protein.
   
 0.974
Pc12g04600
Pc12g04600 protein; Belongs to the sterol desaturase family.
   
 0.973
Pc22g15220
Pc22g15220 protein; Belongs to the sterol desaturase family.
   
 0.961
Pc22g15550
Pc22g15550 protein.
   
 
 0.931
Pc22g07520
Pc22g07520 protein; Belongs to the cytochrome P450 family.
  
  
 
0.902
Pc22g06030
Pc22g06030 protein.
   
 
 0.890
Pc13g05570
Pc13g05570 protein; Belongs to the sterol desaturase family.
   
 
 0.834
Pc21g21280
Pc21g21280 protein; Belongs to the sterol desaturase family.
   
 
 0.834
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.