STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc18g05620Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family. (364 aa)    
Predicted Functional Partners:
Pc14g00720
Pc14g00720 protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
   
 
 0.617
act
Gamma-actin act-Penicillium chrysogenum.
    
 
 0.613
Pc20g00490
Pc20g00490 protein.
      
 0.565
Pc13g09170
Pc13g09170 protein.
      
 0.546
Pc13g05480
Pc13g05480 protein.
    
 
 0.523
Pc12g12940
Pc12g12940 protein.
      
 0.518
Pc12g08590
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.
   
  
 0.478
Pc13g13570
Pc13g13570 protein.
   
    0.472
Pc22g09190
Pc22g09190 protein.
   
    0.472
Pc18g06100
Pc18g06100 protein.
   
  
 0.459
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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