STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc20g14470Pc20g14470 protein; Belongs to the protein kinase superfamily. (391 aa)    
Predicted Functional Partners:
Pc13g10770
Pc13g10770 protein.
 
 
 0.996
Pc12g11480
Pc12g11480 protein.
    
 0.961
Pc12g00100
Pc12g00100 protein.
   
0.937
Pc13g05140
Pc13g05140 protein.
   
 0.931
Pc13g14290
Pc13g14290 protein.
   
 0.931
Pc21g05940
Pc21g05940 protein.
   
 0.931
Pc22g03870
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
  
0.931
stuA
Cell pattern formation-associated protein stuA; Transcription factor that regulates asexual reproduction. Binds the StuA-response elements (StRE) with the consensus sequence 5'-(A/T)CGCG(T/A)N(A/C)-3' at the promoters of target genes (By similarity). Controls the expression of the penicillin gene cluster.
    
 0.924
Pc20g08390
Pc20g08390 protein.
   
 0.921
Pc22g16500
Pc22g16500 protein; Belongs to the protein kinase superfamily.
  
0.915
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.