Pc22g03670 protein (Penicillium rubens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Pc22g03670

Trehalase. (731 aa)

Predicted Functional Partners:

Pc20g08480

0.978

Pc20g06250

0.952

Pc21g04930

0.952

Pc18g06330

0.949

Pc22g02020

0.781

Pc24g00740

0.781

Pc18g01390

0.758

Pc21g10060

0.720

Pc16g11870

0.708

Pc13g11660

0.658

Your Current Organism:

Penicillium rubens

NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Pc13g11660	Pc16g11870	B6H4Z0	B6H9U0	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Pc16g11870 protein.	0.637
Pc13g11660	Pc18g01390	B6H4Z0	B6HCB0	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Pc18g01390 protein; Belongs to the phosphohexose mutase family.	0.999
Pc13g11660	Pc18g06330	B6H4Z0	B6HCM9	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Pc18g06330 protein.	0.485
Pc13g11660	Pc20g06250	B6H4Z0	B6HG46	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Pc20g06250 protein.	0.540
Pc13g11660	Pc20g08480	B6H4Z0	B6HEX8	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Pc20g08480 protein.	0.508
Pc13g11660	Pc21g04930	B6H4Z0	B6HN63	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Pc21g04930 protein.	0.540
Pc13g11660	Pc21g10060	B6H4Z0	B6HI24	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Pc21g10060 protein.	0.999
Pc13g11660	Pc22g02020	B6H4Z0	B6HP54	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Trehalose-6-phosphate synthase.	0.452
Pc13g11660	Pc22g03670	B6H4Z0	B6HRS3	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Trehalase.	0.658
Pc13g11660	Pc24g00740	B6H4Z0	B6HWN2	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Pc24g00740 protein.	0.452
Pc16g11870	Pc13g11660	B6H9U0	B6H4Z0	Pc16g11870 protein.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.637
Pc16g11870	Pc20g08480	B6H9U0	B6HEX8	Pc16g11870 protein.	Pc20g08480 protein.	0.400
Pc16g11870	Pc21g10060	B6H9U0	B6HI24	Pc16g11870 protein.	Pc21g10060 protein.	0.521
Pc16g11870	Pc22g02020	B6H9U0	B6HP54	Pc16g11870 protein.	Trehalose-6-phosphate synthase.	0.614
Pc16g11870	Pc22g03670	B6H9U0	B6HRS3	Pc16g11870 protein.	Trehalase.	0.708
Pc16g11870	Pc24g00740	B6H9U0	B6HWN2	Pc16g11870 protein.	Pc24g00740 protein.	0.614
Pc18g01390	Pc13g11660	B6HCB0	B6H4Z0	Pc18g01390 protein; Belongs to the phosphohexose mutase family.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.999
Pc18g01390	Pc18g06330	B6HCB0	B6HCM9	Pc18g01390 protein; Belongs to the phosphohexose mutase family.	Pc18g06330 protein.	0.497
Pc18g01390	Pc20g06250	B6HCB0	B6HG46	Pc18g01390 protein; Belongs to the phosphohexose mutase family.	Pc20g06250 protein.	0.530
Pc18g01390	Pc20g08480	B6HCB0	B6HEX8	Pc18g01390 protein; Belongs to the phosphohexose mutase family.	Pc20g08480 protein.	0.577