STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALA1Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family. (958 aa)    
Predicted Functional Partners:
Pc21g15370
Pc21g15370 protein.
   
 0.916
Pc06g01880
Pc06g01880 protein.
   
 0.914
Pc20g07390
Pc20g07390 protein.
   
 0.911
Pc20g08020
Pc20g08020 protein.
    
 0.910
phyA
Phytase phyA from patent WO2003038111-A2-Penicillium chrysogenum; Belongs to the histidine acid phosphatase family.
      
 0.908
Pc22g09720
Pc22g09720 protein; Belongs to the cullin family.
    
 0.908
Pc16g13340
Pc16g13340 protein.
    
 0.907
Pc22g09820
Pc22g09820 protein.
    
 0.860
Pc20g01010
Pc20g01010 protein.
  
 
 0.826
Pc22g00880
Pc22g00880 protein; Belongs to the universal ribosomal protein uS13 family.
    
 0.811
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.