STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc22g19820Pc22g19820 protein. (500 aa)    
Predicted Functional Partners:
Pc22g15990
Pc22g15990 protein.
   
 
 0.695
Pc12g02480
Serine/threonine-protein kinase.
  
  
0.669
Pc21g02410
Pc21g02410 protein; Belongs to the cyclin family.
     
 0.652
Pc12g16500
Pc12g16500 protein; Belongs to the protein kinase superfamily.
  
  
 0.640
Pc18g00020
Pc18g00020 protein.
  
  
 0.595
Pc13g03910
Pc13g03910 protein.
     
 0.594
Pc20g05920
Pc20g05920 protein.
   
  
 0.578
Pc13g10740
Pc13g10740 protein; Belongs to the cyclin family.
   
 
 0.495
Pc13g12640
Pc13g12640 protein.
  
 
0.488
Pc12g05720
Pc12g05720 protein; Belongs to the protein kinase superfamily.
  
 
0.469
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.