STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_01051Related to Ras GTPase-activating-like protein IQGAP2. (1794 aa)    
Predicted Functional Partners:
PIIN_11679
Uncharacterized protein.
   
 0.983
PIIN_06198
Probable Myosin regulatory light chain cdc4.
    
 0.977
PIIN_06980
Related to MYO1-myosin-1 isoform (Type II myosin) heavy chain; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 
 0.959
PIIN_02147
Related to GTP binding protein Cdc42.
   
 0.913
PIIN_01667
Uncharacterized protein.
   
 0.876
PIIN_01670
Related to Rac1 GTP binding protein.
   
 0.876
PIIN_08257
Uncharacterized protein.
   
 0.876
PIIN_05132
Probable Calmodulin; Belongs to the calmodulin family.
    
 0.872
PIIN_05133
Probable Calmodulin; Belongs to the calmodulin family.
    
 0.872
PIIN_07651
Probable Calmodulin; Belongs to the calmodulin family.
    
 0.872
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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