STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_11675Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. (1430 aa)    
Predicted Functional Partners:
PIIN_05316
Condensin complex subunit 2; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes.
   
 0.999
PIIN_06249
Probable SMC2-chromosome segregation protein.
   
 0.999
PIIN_01901
Related to SMC4-Stable Maintenance of Chromosomes.
   
 0.993
PIIN_01902
Related to SMC4-Stable Maintenance of Chromosomes.
   
 0.993
PIIN_01135
Related to condensin complex subunit 3.
  
 0.990
PIIN_01131
Related to mitotic chromosome condensation-related protein, putative-Cryptococcus neoformans.
   
 0.987
PIIN_01164
Structural maintenance of chromosomes protein.
   
 0.940
PIIN_04174
SMC_N domain-containing protein.
   
 0.920
PIIN_06852
Structural maintenance of chromosomes protein.
   
 0.918
PIIN_11050
Probable SMC1-chromosome segregation protein.
   
 0.918
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.