STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_01300Related to SEC9-protein transport protein. (410 aa)    
Predicted Functional Partners:
PIIN_02226
Probable synaptobrevin (V-SNARE) homolog.
   
 0.997
PIIN_01441
Related to syntaxin 12; Belongs to the syntaxin family.
   
 0.989
PIIN_07550
Related to syntaxin binding protein 1; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.985
PIIN_02224
Related to vesicle-associated membrane protein 7; Belongs to the synaptobrevin family.
    
 0.979
PIIN_01139
Probable SEC17-transport vesicle fusion protein.
   
 
 0.974
PIIN_03138
Related to SSO1-syntaxin-related protein.
   
 0.974
PIIN_03139
Related to SSO1-syntaxin-related protein.
   
 0.974
PIIN_04601
Related to SEC18-Vesicular-fusion protein, functional homolog of NSF.
   
 
 0.949
PIIN_01785
Lgl_C domain-containing protein.
    
 
 0.939
PIIN_06578
t-SNARE coiled-coil homology domain-containing protein.
    
 0.937
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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