STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_02399Uncharacterized protein. (1352 aa)    
Predicted Functional Partners:
PIIN_05158
Uncharacterized protein.
    
   0.989
PIIN_06882
Uncharacterized protein.
    
 
 0.947
PIIN_02382
Related to 40S ribosomal protein S18-Coprinopsis cinerea.
    
 
 0.838
PIIN_00172
Uncharacterized protein.
    
 
 0.736
PIIN_09760
Probable ser/thr protein phosphotase 2A regulatory subunit A.
   
 0.698
PIIN_08157
Related to Cytokinesis protein sepA.
    
 
 0.690
PIIN_08355
Related to Cytokinesis protein sepA.
    
 
 0.690
PIIN_06011
Uncharacterized protein.
    
  0.676
PIIN_04601
Related to SEC18-Vesicular-fusion protein, functional homolog of NSF.
    
  0.663
PIIN_05131
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.663
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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