STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_02516Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex. (213 aa)    
Predicted Functional Partners:
PIIN_01572
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
   
 0.999
PIIN_08518
Probable syntaxin, vesicular transport protein.
   
 0.999
PIIN_09718
Related to SLY1 protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.999
PIIN_09878
Related to transport protein BET1-Laccaria bicolor.
   
 0.999
PIIN_04404
Probable SEC22-synaptobrevin (V-SNARE); Belongs to the synaptobrevin family.
    
 0.997
PIIN_01914
Related to YKT6-SNARE protein for Endoplasmic Reticulum-Golgi transport; Belongs to the synaptobrevin family.
   
 0.994
PIIN_00109
Uncharacterized protein.
    
 0.989
PIIN_07298
Related to Bet1-like protein-Laccaria bicolor.
   
 0.985
PIIN_01139
Probable SEC17-transport vesicle fusion protein.
    
 0.940
PIIN_01441
Related to syntaxin 12; Belongs to the syntaxin family.
    
 0.912
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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