STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_02699Related to TRX2-thioredoxin II. (289 aa)    
Predicted Functional Partners:
PIIN_07364
Probable RPN11-26S proteasome regulatory subunit.
   
 
 0.925
PIIN_05963
Probable COP9 signalosome subunit 5 CSN5.
   
 
 0.853
PIIN_06459
Probable RPT5-26S proteasome regulatory subunit; Belongs to the AAA ATPase family.
   
   0.718
PIIN_07636
Probable CCT2-chaperonin of the TCP1 ring complex, cytosolic.
   
  0.680
PIIN_02621
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 
  0.678
PIIN_01051
Related to Ras GTPase-activating-like protein IQGAP2.
     
 0.646
PIIN_03742
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
   
  0.643
PIIN_01701
J domain-containing protein.
 
  
 
 0.641
PIIN_05232
Related to 26S proteasome regulatory particle chain RPN9.
   
 
 0.638
PIIN_08403
Probable RPT4-26S proteasome regulatory subunit; Belongs to the AAA ATPase family.
   
   0.635
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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