STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_03868Uncharacterized protein. (441 aa)    
Predicted Functional Partners:
PIIN_08900
Related to Engulfment and cell motility gene 1 protein.
    
 0.935
PIIN_00503
Uncharacterized protein.
  
  
 0.750
PIIN_02953
Related to serine/threonine-protein kinase Chk2.
     
 0.688
PIIN_03801
Uncharacterized protein.
     
 0.681
PIIN_06663
Probable RPL8B-60s large subunit ribosomal protein L7a.e.B.
   
  0.674
PIIN_00385
Related to GTP-binding protein of the rho family.
   
 0.643
PIIN_01667
Uncharacterized protein.
   
 0.643
PIIN_01670
Related to Rac1 GTP binding protein.
   
 0.643
PIIN_01686
Probable GTPase Rho1.
   
 0.643
PIIN_01834
Uncharacterized protein.
   
 0.643
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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