STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_04167Uncharacterized protein. (1075 aa)    
Predicted Functional Partners:
PIIN_05158
Uncharacterized protein.
    
   0.989
PIIN_06011
Uncharacterized protein.
    
  0.676
PIIN_04552
Probable RBG1-ribosome interacting GTPase.
    
   0.641
PIIN_04601
Related to SEC18-Vesicular-fusion protein, functional homolog of NSF.
    
  0.634
PIIN_00149
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
    
   0.627
PIIN_03293
Probable GTPase Rab7 protein.
    
  0.626
PIIN_02226
Probable synaptobrevin (V-SNARE) homolog.
     
 0.612
PIIN_03183
Probable protein kinase CK2 alpha subunit; Belongs to the protein kinase superfamily.
    
 
 0.604
MDM34
Mitochondrial distribution and morphology protein 34; Component of the ERMES/MDM complex, which serves as a molecular tether to connect the endoplasmic reticulum (ER) and mitochondria. Components of this complex are involved in the control of mitochondrial shape and protein biogenesis, and function in nonvesicular lipid trafficking between the ER and mitochondria. MDM34 is required for the interaction of the ER-resident membrane protein MMM1 and the outer mitochondrial membrane-resident beta-barrel protein MDM10.
    
 
 0.604
PIIN_02030
Uncharacterized protein.
   
 0.598
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.