STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_05803Uncharacterized protein. (103 aa)    
Predicted Functional Partners:
PIIN_05761
Uncharacterized protein.
   
 
 0.973
PIIN_04742
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
   
 
 0.968
PIIN_05641
ER membrane protein complex subunit 3; The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER). Belongs to the EMC3 family.
   
 
 0.967
PIIN_06187
TPR_REGION domain-containing protein.
    
 
 0.966
PIIN_00183
EMC1_C domain-containing protein.
    
 
 0.965
PIIN_06273
DUF2012 domain-containing protein.
   
 
 0.959
PIIN_03815
Uncharacterized protein.
    
 
 0.874
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.