PIIN_06700 protein (Serendipita indica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PIIN_06700

Related to potassium transporter TRK-1. (219 aa)

Predicted Functional Partners:

PIIN_06331

0.737

PIIN_03802

0.735

PIIN_06314

0.735

PIIN_05421

0.728

PIIN_04821

0.723

PIIN_00663

0.722

PIIN_07023

0.589

PIIN_01466

0.568

PIIN_07476

0.568

PIIN_08727

0.568

Your Current Organism:

Serendipita indica

NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PIIN_00663	PIIN_01466	G4U2Z6	G4T8I9	V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Probable vacuolar ATP synthase 22 kDa proteolipid subunit; Belongs to the V-ATPase proteolipid subunit family.	0.999
PIIN_00663	PIIN_03802	G4U2Z6	G4TEX0	V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Probable vacuolar ATP synthase subunit D.	0.999
PIIN_00663	PIIN_04821	G4U2Z6	G4THV3	V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	V-type proton ATPase subunit; Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. The active enzyme consists of a catalytic V1 domain attached to an integral membrane V0 proton pore complex. This subunit is a non-integral membrane component of the membrane pore domain and is required for proper assembly of the V0 sector. Might be involved in the regulated assembly of V1 subunits onto the membrane sector or alternatively may prevent the passage of protons through V0 pores; Belongs to the V-ATPase V0D/AC39 subunit family.	0.999
PIIN_00663	PIIN_05421	G4U2Z6	G4TJJ1	V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	0.999
PIIN_00663	PIIN_06314	G4U2Z6	G4TM37	V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Probable TFP1p-H+-ATPase V1 domain 69 KD catalytic subunit, vacuolar.	0.999
PIIN_00663	PIIN_06331	G4U2Z6	G4TM54	V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.	0.999
PIIN_00663	PIIN_06700	G4U2Z6	G4TN64	V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Related to potassium transporter TRK-1.	0.722
PIIN_00663	PIIN_07023	G4U2Z6	G4TP21	V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Probable Vacuolar ATP synthase subunit E.	0.999
PIIN_00663	PIIN_07476	G4U2Z6	G4TQD0	V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.992
PIIN_00663	PIIN_08727	G4U2Z6	G4TTX6	V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.995
PIIN_01466	PIIN_00663	G4T8I9	G4U2Z6	Probable vacuolar ATP synthase 22 kDa proteolipid subunit; Belongs to the V-ATPase proteolipid subunit family.	V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.999
PIIN_01466	PIIN_03802	G4T8I9	G4TEX0	Probable vacuolar ATP synthase 22 kDa proteolipid subunit; Belongs to the V-ATPase proteolipid subunit family.	Probable vacuolar ATP synthase subunit D.	0.999
PIIN_01466	PIIN_04821	G4T8I9	G4THV3	Probable vacuolar ATP synthase 22 kDa proteolipid subunit; Belongs to the V-ATPase proteolipid subunit family.	V-type proton ATPase subunit; Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. The active enzyme consists of a catalytic V1 domain attached to an integral membrane V0 proton pore complex. This subunit is a non-integral membrane component of the membrane pore domain and is required for proper assembly of the V0 sector. Might be involved in the regulated assembly of V1 subunits onto the membrane sector or alternatively may prevent the passage of protons through V0 pores; Belongs to the V-ATPase V0D/AC39 subunit family.	0.999
PIIN_01466	PIIN_05421	G4T8I9	G4TJJ1	Probable vacuolar ATP synthase 22 kDa proteolipid subunit; Belongs to the V-ATPase proteolipid subunit family.	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	0.999
PIIN_01466	PIIN_06314	G4T8I9	G4TM37	Probable vacuolar ATP synthase 22 kDa proteolipid subunit; Belongs to the V-ATPase proteolipid subunit family.	Probable TFP1p-H+-ATPase V1 domain 69 KD catalytic subunit, vacuolar.	0.999
PIIN_01466	PIIN_06331	G4T8I9	G4TM54	Probable vacuolar ATP synthase 22 kDa proteolipid subunit; Belongs to the V-ATPase proteolipid subunit family.	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.	0.999
PIIN_01466	PIIN_06700	G4T8I9	G4TN64	Probable vacuolar ATP synthase 22 kDa proteolipid subunit; Belongs to the V-ATPase proteolipid subunit family.	Related to potassium transporter TRK-1.	0.568
PIIN_01466	PIIN_07023	G4T8I9	G4TP21	Probable vacuolar ATP synthase 22 kDa proteolipid subunit; Belongs to the V-ATPase proteolipid subunit family.	Probable Vacuolar ATP synthase subunit E.	0.999
PIIN_01466	PIIN_07476	G4T8I9	G4TQD0	Probable vacuolar ATP synthase 22 kDa proteolipid subunit; Belongs to the V-ATPase proteolipid subunit family.	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.997
PIIN_01466	PIIN_08727	G4T8I9	G4TTX6	Probable vacuolar ATP synthase 22 kDa proteolipid subunit; Belongs to the V-ATPase proteolipid subunit family.	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.999