STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_07219Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c. (154 aa)    
Predicted Functional Partners:
PIIN_05378
Uncharacterized protein.
   
 
 0.789
PIIN_02618
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
  
 
 0.772
PIIN_08755
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
     
 0.647
PIIN_03412
Probable NADH-ubiquinone oxidoreductase 24 kDa subunit, mitochondrial.
   
  
 0.603
PIIN_01732
Probable CYT1-cytochrome c1, heme protein.
   
 
 0.579
PIIN_00739
Probable cytochrome C; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
   
 
 0.476
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.