STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_08050DUF1768 domain-containing protein. (273 aa)    
Predicted Functional Partners:
PIIN_01564
Uncharacterized protein.
   
 0.769
PIIN_07551
SET domain-containing protein.
   
 0.769
PIIN_09361
Related to SIS2 protein (Cycle-specific gene control).
  
 
 0.641
PIIN_06098
Related to thymidylate synthase.
  
 
 0.621
PIIN_00041
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
   
 
 0.620
PIIN_00250
Related to nucleoside hydrolase.
    
 0.573
PIIN_00805
Related to Pol-like protein-Ciona intestinalis.
   
 
 0.562
PIIN_02995
Related to APN2-AP endonuclease, exonuclease III homolog.
   
 
 0.562
PIIN_06144
Related to thymidylate kinase.
    
 0.562
PIIN_01005
Related to 5`-nucleotidase; Belongs to the 5'-nucleotidase family.
     
 0.546
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.