STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_09434Ricin B-type lectin domain-containing protein. (170 aa)    
Predicted Functional Partners:
PIIN_02226
Probable synaptobrevin (V-SNARE) homolog.
    
 0.734
PIIN_01300
Related to SEC9-protein transport protein.
   
 0.726
PIIN_03138
Related to SSO1-syntaxin-related protein.
    
 0.708
PIIN_03139
Related to SSO1-syntaxin-related protein.
    
 0.708
PIIN_07550
Related to syntaxin binding protein 1; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.647
PIIN_02061
Uncharacterized protein.
     
 0.642
PIIN_01309
ENTH domain-containing protein.
    
 0.641
PIIN_08509
Probable clathrin-associated adaptor complex medium chain; Belongs to the adaptor complexes medium subunit family.
    
 0.621
PIIN_05235
Uncharacterized protein.
    
 0.620
PIIN_09217
MFS domain-containing protein.
     
 0.590
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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