STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_10748Related to serine-threonine kinase. (377 aa)    
Predicted Functional Partners:
PIIN_04148
Autophagy-related protein.
   
 0.957
PIIN_01249
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
   
 0.953
PIIN_02325
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
   
 0.953
PIIN_06072
Related to protein kinase homolog VPS15.
    
 0.951
PIIN_09299
Phosphatidylinositol 3-kinase VPS34.
    
 0.951
PIIN_04843
Related to APG2-required for sporulation.
   
 0.949
PIIN_05652
ATG11 domain-containing protein.
    
 0.924
PIIN_00505
Uncharacterized protein.
   
 
 0.909
PIIN_04640
Uncharacterized protein.
    
 0.908
PIIN_09817
DUF3543 domain-containing protein.
 
      0.899
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.