STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_11011Uncharacterized protein. (176 aa)    
Predicted Functional Partners:
PIIN_06897
Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.
   
    0.765
PIIN_02602
Related to LTV1-low-temperature viability protein.
   
    0.710
PIIN_01260
annotation not available
   
    0.597
PIIN_00885
Related to NOP15-protein involved in 60S ribosomal subunit biogenesis.
   
    0.594
PIIN_03596
Related to S. pombe beta-transducin.
   
   0.592
PIIN_08100
Related to RRP1-involved in processing rRNA species to mature rRNAs.
   
    0.578
PIIN_05178
Related to ENP1-required for pre-rRNA processing and 40S ribosomal subunit synthesis.
   
  
 0.564
PIIN_03192
Probable ROK1-ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
   
  
 0.563
PIIN_04149
Related to protein RPF2 involved in ribosomal large subunit assembly and maintenance.
   
   0.540
PIIN_01440
Uncharacterized protein.
   
 
 0.530
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.