Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| TMO_0177 | TMO_0178 | TMO_0177 | TMO_0178 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | ABC transporter, ATP-binding protein. | 0.925 |
| TMO_0177 | TMO_0179 | TMO_0177 | TMO_0179 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hypothetical protein. | 0.770 |
| TMO_0177 | TMO_0180 | TMO_0177 | TMO_0180 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Lipopolysaccharide export system protein LptC. | 0.707 |
| TMO_0177 | TMO_0181 | TMO_0177 | TMO_0181 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Putative sugar phosphate isomerase involved in capsule formation; Belongs to the SIS family. GutQ/KpsF subfamily. | 0.605 |
| TMO_0177 | hpf | TMO_0177 | TMO_0176 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Sigma 54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | 0.778 |
| TMO_0178 | TMO_0177 | TMO_0178 | TMO_0177 | ABC transporter, ATP-binding protein. | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.925 |
| TMO_0178 | TMO_0179 | TMO_0178 | TMO_0179 | ABC transporter, ATP-binding protein. | Hypothetical protein. | 0.969 |
| TMO_0178 | TMO_0180 | TMO_0178 | TMO_0180 | ABC transporter, ATP-binding protein. | Lipopolysaccharide export system protein LptC. | 0.976 |
| TMO_0178 | TMO_0181 | TMO_0178 | TMO_0181 | ABC transporter, ATP-binding protein. | Putative sugar phosphate isomerase involved in capsule formation; Belongs to the SIS family. GutQ/KpsF subfamily. | 0.852 |
| TMO_0178 | TMO_1847 | TMO_0178 | TMO_1847 | ABC transporter, ATP-binding protein. | Putative permease. | 0.994 |
| TMO_0178 | TMO_1848 | TMO_0178 | TMO_1848 | ABC transporter, ATP-binding protein. | Putative permease. | 0.996 |
| TMO_0178 | hpf | TMO_0178 | TMO_0176 | ABC transporter, ATP-binding protein. | Sigma 54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | 0.705 |
| TMO_0178 | lptD | TMO_0178 | TMO_1849 | ABC transporter, ATP-binding protein. | Organic solvent tolerance protein OstA; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.680 |
| TMO_0179 | TMO_0177 | TMO_0179 | TMO_0177 | Hypothetical protein. | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.770 |
| TMO_0179 | TMO_0178 | TMO_0179 | TMO_0178 | Hypothetical protein. | ABC transporter, ATP-binding protein. | 0.969 |
| TMO_0179 | TMO_0180 | TMO_0179 | TMO_0180 | Hypothetical protein. | Lipopolysaccharide export system protein LptC. | 0.932 |
| TMO_0179 | TMO_0181 | TMO_0179 | TMO_0181 | Hypothetical protein. | Putative sugar phosphate isomerase involved in capsule formation; Belongs to the SIS family. GutQ/KpsF subfamily. | 0.689 |
| TMO_0179 | TMO_1847 | TMO_0179 | TMO_1847 | Hypothetical protein. | Putative permease. | 0.650 |
| TMO_0179 | TMO_1848 | TMO_0179 | TMO_1848 | Hypothetical protein. | Putative permease. | 0.650 |
| TMO_0179 | hpf | TMO_0179 | TMO_0176 | Hypothetical protein. | Sigma 54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | 0.625 |
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