STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
appC-3ABC transporter permease protein. (302 aa)    
Predicted Functional Partners:
TMO_1184
ABC transporter ATP binding protein; Belongs to the ABC transporter superfamily.
  
 0.990
TMO_1183
Oligopeptide/dipeptide ABC transporter, ATPase subunit; Belongs to the ABC transporter superfamily.
  
 0.989
dppD
ABC transporter related protein.
  
 0.984
appD
Oligopeptide/dipeptide ABC transporter, ATPase subunit; Belongs to the ABC transporter superfamily.
  
 0.976
dppD-2
Dipeptide ABC superfamily ATP binding cassette transporter, ABC protein; Belongs to the ABC transporter superfamily.
  
 0.976
dppF-2
DppF; Belongs to the ABC transporter superfamily.
 
 0.975
gsiC
Binding-protein-dependent transport systems inner membrane component.
  
 0.974
dppF
Putative oligopeptide ABC transporter (ATP binding protein); Belongs to the ABC transporter superfamily.
  
 0.963
gsiA
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.929
gsiA-5
ABC superfamily ATP binding cassette transporter, ABC protein; Belongs to the ABC transporter superfamily.
  
 0.925
Your Current Organism:
Tistrella mobilis
NCBI taxonomy Id: 1110502
Other names: T. mobilis KA081020-065, Tistrella mobilis KA081020-065, Tistrella mobilis str. KA081020-065, Tistrella mobilis strain KA081020-065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.