STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glpR-2Transcriptional regulator, DeoR family. (255 aa)    
Predicted Functional Partners:
fruK
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.867
fruA
PTS system, fructose-specific IIC component.
 
  
 0.811
ugpC
ABC superfamily ATP binding cassette transporter, ABC protein; Belongs to the ABC transporter superfamily.
     
 0.786
ugpB
Extracellular solute-binding protein.
 
   
 0.738
glpD
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.631
fruB
Phosphotransferase system, enzyme I.
  
  
 0.628
yfiQ
CoA-binding domain protein.
    
   0.615
glpD-2
Glycerol-3-phosphate dehydrogenase.
 
  
 0.606
araQ
ABC superfamily ATP binding cassette transporter, membrane protein.
 
   
 0.581
yurN
Inner membrane component of binding-protein-dependent transport system.
 
   
 0.573
Your Current Organism:
Tistrella mobilis
NCBI taxonomy Id: 1110502
Other names: T. mobilis KA081020-065, Tistrella mobilis KA081020-065, Tistrella mobilis str. KA081020-065, Tistrella mobilis strain KA081020-065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.