STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000472905_01984Unannotated protein. (162 aa)    
Predicted Functional Partners:
GCA_000472905_02904
Unannotated protein.
   
 0.997
GCA_000472905_02905
Unannotated protein.
   
 0.997
GCA_000472905_01986
Unannotated protein.
  
 0.993
GCA_000472905_01849
Unannotated protein.
   
  0.975
GCA_000472905_03181
Unannotated protein.
   
 0.974
GCA_000472905_03160
Unannotated protein.
   
  0.971
GCA_000472905_01985
Unannotated protein.
  
  
 0.954
GCA_000472905_01982
Unannotated protein.
  
  
 0.941
GCA_000472905_03161
Unannotated protein.
 
 
 
 0.914
GCA_000472905_01725
Unannotated protein.
 
 
 0.908
Your Current Organism:
Alicyclobacillus pomorum
NCBI taxonomy Id: 1111479
Other names: A. pomorum DSM 14955, Alicyclobacillus pomorum 3A, Alicyclobacillus pomorum DSM 14955, Alicyclobacillus pomorum NBRC 100861, Alicyclobacillus pomorum str. DSM 14955, Alicyclobacillus pomorum strain DSM 14955
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.