STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000472905_02561Unannotated protein. (151 aa)    
Predicted Functional Partners:
GCA_000472905_02559
Unannotated protein.
 
  
 0.999
GCA_000472905_02562
Unannotated protein.
 
  
 0.995
GCA_000472905_02563
Unannotated protein.
 
 
 0.995
GCA_000472905_02560
Unannotated protein.
 
  
 0.994
GCA_000472905_02564
Unannotated protein.
 
  
 0.978
GCA_000472905_02558
Unannotated protein.
       0.731
GCA_000472905_01287
Unannotated protein.
 
   
 0.626
GCA_000472905_02268
Unannotated protein.
     
 0.524
Your Current Organism:
Alicyclobacillus pomorum
NCBI taxonomy Id: 1111479
Other names: A. pomorum DSM 14955, Alicyclobacillus pomorum 3A, Alicyclobacillus pomorum DSM 14955, Alicyclobacillus pomorum NBRC 100861, Alicyclobacillus pomorum str. DSM 14955, Alicyclobacillus pomorum strain DSM 14955
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.