Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFA72844.1 | AFA72963.1 | GPOL_c17960 | GPOL_c19220 | Putative ferredoxin-dependent glutamate synthase. | Putative NAD-specific glutamate dehydrogenase. | 0.938 |
AFA72844.1 | acn | GPOL_c17960 | GPOL_c23340 | Putative ferredoxin-dependent glutamate synthase. | Aconitate hydratase Acn. | 0.589 |
AFA72844.1 | argH | GPOL_c17960 | GPOL_c26050 | Putative ferredoxin-dependent glutamate synthase. | Argininosuccinate lyase ArgH. | 0.516 |
AFA72844.1 | gltB1 | GPOL_c17960 | GPOL_c03080 | Putative ferredoxin-dependent glutamate synthase. | Glutamate synthase large subunit GltB. | 0.999 |
AFA72844.1 | gltB2 | GPOL_c17960 | GPOL_c27010 | Putative ferredoxin-dependent glutamate synthase. | Glutamate synthase [NADPH] small chain GltB. | 0.999 |
AFA72844.1 | gltB3 | GPOL_c17960 | GPOL_c27020 | Putative ferredoxin-dependent glutamate synthase. | Ferredoxin-dependent glutamate synthase 1. | 0.999 |
AFA72844.1 | gltD | GPOL_c17960 | GPOL_c03090 | Putative ferredoxin-dependent glutamate synthase. | Glutamate synthase small subunit GltD. | 0.999 |
AFA72844.1 | icd | GPOL_c17960 | GPOL_c24630 | Putative ferredoxin-dependent glutamate synthase. | Isocitrate dehydrogenase [NADP] Icd; Belongs to the monomeric-type IDH family. | 0.870 |
AFA72844.1 | ldh | GPOL_c17960 | GPOL_c38180 | Putative ferredoxin-dependent glutamate synthase. | L-lactate dehydrogenase Ldh; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.473 |
AFA72844.1 | purB | GPOL_c17960 | GPOL_c42100 | Putative ferredoxin-dependent glutamate synthase. | Adenylosuccinate lyase PurB; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.516 |
AFA72963.1 | AFA72844.1 | GPOL_c19220 | GPOL_c17960 | Putative NAD-specific glutamate dehydrogenase. | Putative ferredoxin-dependent glutamate synthase. | 0.938 |
AFA72963.1 | gltB1 | GPOL_c19220 | GPOL_c03080 | Putative NAD-specific glutamate dehydrogenase. | Glutamate synthase large subunit GltB. | 0.938 |
AFA72963.1 | gltB2 | GPOL_c19220 | GPOL_c27010 | Putative NAD-specific glutamate dehydrogenase. | Glutamate synthase [NADPH] small chain GltB. | 0.905 |
AFA72963.1 | gltB3 | GPOL_c19220 | GPOL_c27020 | Putative NAD-specific glutamate dehydrogenase. | Ferredoxin-dependent glutamate synthase 1. | 0.938 |
AFA72963.1 | gltD | GPOL_c19220 | GPOL_c03090 | Putative NAD-specific glutamate dehydrogenase. | Glutamate synthase small subunit GltD. | 0.905 |
AFA72963.1 | icd | GPOL_c19220 | GPOL_c24630 | Putative NAD-specific glutamate dehydrogenase. | Isocitrate dehydrogenase [NADP] Icd; Belongs to the monomeric-type IDH family. | 0.825 |
acn | AFA72844.1 | GPOL_c23340 | GPOL_c17960 | Aconitate hydratase Acn. | Putative ferredoxin-dependent glutamate synthase. | 0.589 |
acn | gltB1 | GPOL_c23340 | GPOL_c03080 | Aconitate hydratase Acn. | Glutamate synthase large subunit GltB. | 0.589 |
acn | gltB3 | GPOL_c23340 | GPOL_c27020 | Aconitate hydratase Acn. | Ferredoxin-dependent glutamate synthase 1. | 0.589 |
acn | icd | GPOL_c23340 | GPOL_c24630 | Aconitate hydratase Acn. | Isocitrate dehydrogenase [NADP] Icd; Belongs to the monomeric-type IDH family. | 0.964 |
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