Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFA71331.1 | AFA71949.1 | GPOL_c02580 | GPOL_c08840 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Putative aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.928 |
AFA71331.1 | AFA72844.1 | GPOL_c02580 | GPOL_c17960 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Putative ferredoxin-dependent glutamate synthase. | 0.675 |
AFA71331.1 | AFA75404.1 | GPOL_c02580 | GPOL_c44010 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Putative 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.928 |
AFA71331.1 | gabT | GPOL_c02580 | GPOL_c10680 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 4-aminobutyrate transaminase GabT; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.928 |
AFA71331.1 | gadB | GPOL_c02580 | GPOL_c34020 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Glutamate decarboxylase GadB; Belongs to the group II decarboxylase family. | 0.920 |
AFA71331.1 | glsA | GPOL_c02580 | GPOL_c18370 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Glutaminase GlsA; Belongs to the glutaminase family. | 0.830 |
AFA71331.1 | gltB1 | GPOL_c02580 | GPOL_c03080 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Glutamate synthase large subunit GltB. | 0.675 |
AFA71331.1 | gltB3 | GPOL_c02580 | GPOL_c27020 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Ferredoxin-dependent glutamate synthase 1. | 0.675 |
AFA71331.1 | panC | GPOL_c02580 | GPOL_c43270 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Pantothenate synthetase PanC; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.903 |
AFA71949.1 | AFA71331.1 | GPOL_c08840 | GPOL_c02580 | Putative aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.928 |
AFA71949.1 | AFA75404.1 | GPOL_c08840 | GPOL_c44010 | Putative aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Putative 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.916 |
AFA71949.1 | dhaS1 | GPOL_c08840 | GPOL_c14710 | Putative aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Aldehyde dehydrogenase DhaS. | 0.928 |
AFA71949.1 | gabT | GPOL_c08840 | GPOL_c10680 | Putative aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 4-aminobutyrate transaminase GabT; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.921 |
AFA71949.1 | gadB | GPOL_c08840 | GPOL_c34020 | Putative aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Glutamate decarboxylase GadB; Belongs to the group II decarboxylase family. | 0.940 |
AFA71949.1 | panC | GPOL_c08840 | GPOL_c43270 | Putative aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Pantothenate synthetase PanC; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.904 |
AFA72844.1 | AFA71331.1 | GPOL_c17960 | GPOL_c02580 | Putative ferredoxin-dependent glutamate synthase. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.675 |
AFA72844.1 | dhaS1 | GPOL_c17960 | GPOL_c14710 | Putative ferredoxin-dependent glutamate synthase. | Aldehyde dehydrogenase DhaS. | 0.675 |
AFA72844.1 | gadB | GPOL_c17960 | GPOL_c34020 | Putative ferredoxin-dependent glutamate synthase. | Glutamate decarboxylase GadB; Belongs to the group II decarboxylase family. | 0.936 |
AFA72844.1 | glsA | GPOL_c17960 | GPOL_c18370 | Putative ferredoxin-dependent glutamate synthase. | Glutaminase GlsA; Belongs to the glutaminase family. | 0.950 |
AFA72844.1 | gltB1 | GPOL_c17960 | GPOL_c03080 | Putative ferredoxin-dependent glutamate synthase. | Glutamate synthase large subunit GltB. | 0.999 |
page 1 of 4