STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000527095_01663Unannotated protein. (358 aa)    
Predicted Functional Partners:
GCA_000527095_02830
Unannotated protein.
 
  
 0.862
GCA_000527095_02364
Unannotated protein.
    
 0.843
GCA_000527095_02894
Unannotated protein.
  
 
 0.733
GCA_000527095_02251
Unannotated protein.
    
 0.705
GCA_000527095_01708
Unannotated protein.
  
  
 0.664
GCA_000527095_00134
Unannotated protein.
    
 0.613
GCA_000527095_02098
Unannotated protein.
    
 0.582
GCA_000527095_03526
Unannotated protein.
    
 0.580
GCA_000527095_00480
Unannotated protein.
 
   
  0.578
GCA_000527095_00513
Unannotated protein.
   
 0.575
Your Current Organism:
Methylosarcina lacus
NCBI taxonomy Id: 1114263
Other names: M. lacus LW14, Methylosarcina lacus LW14, Methylosarcina lacus str. LW14, Methylosarcina lacus strain LW14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.