STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpoEDNA-directed RNA polymerase, delta subunit. (142 aa)    
Predicted Functional Partners:
rpoBC
DNA-directed RNA polymerase, beta and beta' subunit.
    
 
 0.999
gltX
glutamyl-tRNA synthetase.
  
    0.850
dGTPase
Deoxyguanosinetriphosphate triphosphohydrolase.
       0.832
rpoD
RNA polymerase sigma factor RpoD.
   
 
 0.655
rluA2
Ribosomal large subunit pseudouridine synthase D.
  
    0.619
rpoA
DNA-directed RNA polymerase, alpha subunit.
    
 
 0.616
MHM_01210
Hypothetical protein.
       0.503
Your Current Organism:
Mycoplasma haemominutum
NCBI taxonomy Id: 1116213
Other names: C. Mycoplasma haemominutum 'Birmingham 1', Candidatus Mycoplasma haemominutum 'Birmingham 1'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.