STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERG53283.1COG2866 Predicted carboxypeptidase. (733 aa)    
Predicted Functional Partners:
ERG52038.1
COG5640 Secreted trypsin-like serine protease.
  
 
   0.681
ERG53037.1
Putative lipoprotein.
  
     0.630
ERG52636.1
Serine protease; COG5640 Secreted trypsin-like serine protease.
  
     0.560
ERG53083.1
COG1404 Subtilisin-like serine proteases; Belongs to the peptidase S8 family.
  
   
 0.544
ERG51496.1
Hypothetical protein; COG1404 Subtilisin-like serine proteases; Belongs to the peptidase S8 family.
  
 
   0.542
moeB
Adenylyltransferase; COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2.
       0.496
thiDE
Phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
       0.494
ERG53952.1
COG0515 Serine/threonine protein kinase.
  
     0.470
ERG53863.1
Peptidase S8/S53 subtilisin kexin sedolisin; COG1404 Subtilisin-like serine proteases; Belongs to the peptidase S8 family.
  
   
 0.468
ERG53944.1
COG2356 Endonuclease I.
  
     0.458
Your Current Organism:
Pseudoalteromonas spongiae
NCBI taxonomy Id: 1117319
Other names: P. spongiae UST010723-006, Pseudoalteromonas spongiae UST010723-006
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