STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ34462.1PFAM: Bacterial regulatory proteins, luxR family; NB-ARC domain; InterPro IPR000792; KEGG: cyc:PCC7424_3256 transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; SPTR: Transcriptional regulator, LuxR family. (432 aa)    
Predicted Functional Partners:
AFZ34935.1
WD-40 repeat-containing protein; PFAM: WD domain, G-beta repeat; COGs: COG2319 FOG: WD40 repeat; InterPro IPR019781:IPR001680; KEGG: cyh:Cyan8802_0693 WD-40 repeat protein; PFAM: WD40 repeat, subgroup; SMART: WD40 repeat; SPTR: WD-40 repeat protein.
 
     0.878
AFZ36898.1
KEGG: cyc:PCC7424_4079 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.697
AFZ37762.1
KEGG: ter:Tery_2185 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.636
AFZ36910.1
WD-40 repeat-containing protein; PFAM: WD domain, G-beta repeat; COGs: COG2319 FOG: WD40 repeat; InterPro IPR001680:IPR019781; KEGG: ana:alr2791 WD repeat-containing protein; PFAM: WD40 repeat, subgroup; SMART: WD40 repeat; SPTR: WD-40 repeat protein.
 
     0.634
AFZ34966.1
CsbD family protein; PFAM: CsbD-like; InterPro IPR008462; KEGG: npu:Npun_R3254 CsbD family protein; PFAM: CsbD-like; SPTR: CsbD family protein; Belongs to the UPF0337 (CsbD) family.
  
     0.620
AFZ35265.1
ATP-binding region ATPase domain protein; PFAM: Protein kinase domain; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; His Kinase A (phosphoacceptor) domain; COGs: COG3899 ATPase; InterProIPR020635:IPR002290:IPR003018:IPR003661:IPR 003594:IPR001789:IPR017442; KEGG: cyn:Cyan7425_0791 ATP-binding region ATPase domain protein; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Serine/threonine-protein kinase-like domain; GAF; Signal transduction response regu [...]
   
 
 0.620
AFZ34965.1
CsbD family protein; PFAM: CsbD-like; InterPro IPR008462; KEGG: ava:Ava_4678 CsbD-like; PFAM: CsbD-like; SPTR: CsbD-like; Belongs to the UPF0337 (CsbD) family.
  
     0.600
AFZ34964.1
CsbD family protein; PFAM: CsbD-like; InterPro IPR008462; KEGG: ava:Ava_4678 CsbD-like; PFAM: CsbD-like; SPTR: CsbD-like; Belongs to the UPF0337 (CsbD) family.
  
     0.592
AFZ35050.1
PFAM: Protein kinase domain; GAF domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG3899 ATPase; InterPro IPR000160:IPR017442:IPR003018:IPR002290; KEGG: npu:Npun_F3830 multi-sensor signal transduction multi-kinase; PFAM: Diguanylate cyclase, predicted; Serine/threonine-protein kinase-like domain; GAF; SMART: Diguanylate cyclase, predicted; Serine/threonine-protein kinase domain; GAF; SPTR: Multi-sensor signal transduction multi-kinase; TIGRFAM: Diguanylate cyclase, predicted.
   
 
 0.580
AFZ35200.1
Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily; KEGG: cyc:PCC7424_3174 beta-lactamase domain protein; SPTR: Putative uncharacterized protein.
  
 
   0.559
Your Current Organism:
Stanieria cyanosphaera
NCBI taxonomy Id: 111780
Other names: Dermocarpa sp. PCC 7437, S. cyanosphaera PCC 7437, Stanieria cyanosphaera PCC 7437, Stanieria cyanosphaera str. PCC 7437, Stanieria sp. ATCC 29371, Stanieria sp. PCC 7437
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.