STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_18931Uncharacterized protein. (428 aa)    
Predicted Functional Partners:
B5M09_008496
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.771
H257_01825
NEK protein kinase.
    
  0.612
H257_16246
Uncharacterized protein.
   
  0.576
H257_05035
Uncharacterized protein.
 
      0.540
H257_05034
Uncharacterized protein.
 
  
   0.537
B5M09_005434
DPH-type MB domain-containing protein.
    
 
 0.533
H257_05561
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.
    
  0.482
H257_05090
E2_bind domain-containing protein.
    
  0.482
H257_11344
Ubiquitin-60S ribosomal protein L40.
    
  0.481
H257_18296
CS domain-containing protein.
    
  0.472
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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