STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (245 aa)    
Predicted Functional Partners:
H257_07690
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
  
 
 0.997
H257_00699
60S ribosomal protein L31.
  
 
 0.997
H257_04280
60S ribosomal protein L30.
   
 
 0.995
H257_06026
SBDS family rRNA metabolism protein.
  
 
 0.993
H257_06025
SBDS family rRNA metabolism protein.
  
 
 0.993
B5M09_007320
Uncharacterized protein.
  
 
 0.992
H257_00217
60S ribosomal protein; Belongs to the universal ribosomal protein uL3 family.
  
 
 0.992
B5M09_001776
TRASH domain-containing protein.
   
 0.991
H257_17545
60S ribosomal protein.
  
 
 0.990
H257_11950
Archaeal ribosomal protein L23; Belongs to the universal ribosomal protein uL23 family.
  
 0.990
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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