STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_15801SEC7 domain-containing protein. (1447 aa)    
Predicted Functional Partners:
H257_13452
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.891
H257_16426
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.809
B5M09_008830
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.809
H257_15094
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.809
H257_15545
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.809
H257_15002
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.809
H257_14039
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.809
H257_11704
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.809
H257_11703
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.809
H257_05941
Uncharacterized protein.
    
 0.809
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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