STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_14600Uncharacterized protein. (663 aa)    
Predicted Functional Partners:
H257_06183
SWIB domain-containing protein.
    
 0.825
H257_01200
Uncharacterized protein.
    
 0.810
H257_14898
HMG box domain-containing protein.
    
 0.794
H257_10860
HMG box domain-containing protein.
    
 0.794
H257_10617
Uncharacterized protein; Belongs to the actin family.
    
 0.791
B5M09_004020
Uncharacterized protein; Belongs to the actin family.
    
 0.791
H257_06541
SWIRM domain-containing protein.
    
 0.790
B5M09_002213
Uncharacterized protein.
    
 0.789
H257_14082
ARID domain-containing protein.
    
 0.770
B5M09_000624
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.739
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
Server load: low (26%) [HD]