STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B5M09_010013Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (292 aa)    
Predicted Functional Partners:
B5M09_004143
Uncharacterized protein.
    
  0.939
H257_04279
RRM domain-containing protein.
    
 0.935
B5M09_004737
Uncharacterized protein.
   
 0.930
H257_15867
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
  
  
 
0.924
H257_09714
Uncharacterized protein.
    
  0.911
H257_04896
Uncharacterized protein.
   
 0.899
H257_04906
CMGC/CK2 protein kinase.
   
 0.899
H257_04908
CMGC/CK2 protein kinase.
   
 0.899
H257_13338
WD_REPEATS_REGION domain-containing protein.
   
 
 0.860
H257_02784
S4 RNA-binding domain-containing protein.
   
   0.835
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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