STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B5M09_001154Fumarate hydratase, mitochondrial. (487 aa)    
Predicted Functional Partners:
DYB25_002648
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
 
 0.977
DYB25_006386
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 0.967
H257_05662
Malate dehydrogenase.
  
 0.963
H257_08692
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit.
   
 0.958
H257_09824
Uncharacterized protein; Belongs to the LDH/MDH superfamily.
  
 0.956
H257_18337
Citrate synthase; Belongs to the citrate synthase family.
  
 0.953
DYB28_014001
Succinate dehydrogenase, cytochrome b556 subunit.
  
 
 0.953
DYB35_010889
Aspartate aminotransferase.
   
 0.946
H257_03097
Malic enzyme.
  
 
 0.937
H257_10015
Malate synthase; Belongs to the malate synthase family.
    
 0.915
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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