STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_08702Xpo1 domain-containing protein. (1183 aa)    
Predicted Functional Partners:
B5M09_008496
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.958
H257_12609
Uncharacterized protein.
    
 0.827
H257_00216
Uncharacterized protein.
    
 0.827
H257_09740
Peptidase S59 domain-containing protein.
    
 0.817
H257_05388
Uncharacterized protein.
    
 0.666
H257_13991
Snurportin1 domain-containing protein.
    
 
 0.636
H257_09614
Uncharacterized protein.
    
 0.619
H257_16335
RanBD1 domain-containing protein.
    
 
 0.617
B5M09_007292
RanBD1 domain-containing protein.
    
 
 0.617
B5M09_000605
GRIP domain-containing protein.
    
 
 0.617
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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