STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_07526AMP-binding domain-containing protein. (680 aa)    
Predicted Functional Partners:
B5M09_005534
Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.
     
 0.773
H257_08624
Holo-[acyl-carrier-protein] synthase.
   
 0.744
H257_05673
SAT domain-containing protein.
   
 0.744
H257_13687
PNPLA domain-containing protein.
  
 
 0.720
H257_07377
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.654
H257_11344
Ubiquitin-60S ribosomal protein L40.
    
  0.646
H257_10389
Uncharacterized protein.
  
  
 
0.628
H257_10391
AMP-binding domain-containing protein.
  
  
 
0.628
H257_03711
CMGC protein kinase.
    
 0.606
H257_11018
Uncharacterized protein.
    
 0.594
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.