STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_00196Uncharacterized protein. (1195 aa)    
Predicted Functional Partners:
H257_18759
Spindle pole body component.
    
 0.979
H257_11233
Spindle pole body component.
  
0.979
H257_07378
Spindle pole body component.
   
 0.979
H257_13533
Uncharacterized protein.
   
 0.977
H257_07853
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.960
H257_04963
Tubulin domain-containing protein; Belongs to the tubulin family.
   
 0.960
H257_01472
Tubulin domain-containing protein; Belongs to the tubulin family.
   
 0.960
H257_13900
WD_REPEATS_REGION domain-containing protein.
   
 0.809
H257_18501
Uncharacterized protein.
    
 0.734
B5M09_007908
Uncharacterized protein.
    
 0.734
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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