STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379625_02980Unannotated protein. (341 aa)    
Predicted Functional Partners:
GCA_000379625_01181
Unannotated protein.
    
  0.769
GCA_000379625_00723
Unannotated protein.
  
 
  0.717
GCA_000379625_03172
Unannotated protein.
   
 
  0.712
GCA_000379625_04005
Unannotated protein.
     
 0.691
GCA_000379625_03598
Unannotated protein.
  
     0.690
GCA_000379625_01518
Unannotated protein.
  
     0.680
GCA_000379625_02577
Unannotated protein.
   
 
  0.677
GCA_000379625_01126
Unannotated protein.
     
 0.656
GCA_000379625_05621
Unannotated protein.
     
 0.656
GCA_000379625_02981
Unannotated protein.
       0.615
Your Current Organism:
Actinomycetospora chiangmaiensis
NCBI taxonomy Id: 1120948
Other names: A. chiangmaiensis DSM 45062, Actinomycetospora chiangmaiensis DSM 45062
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