STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379625_04388Unannotated protein. (149 aa)    
Predicted Functional Partners:
GCA_000379625_04549
Unannotated protein.
    
 0.977
GCA_000379625_05312
Unannotated protein.
   
 
 0.964
GCA_000379625_04481
Unannotated protein.
 
 
 0.933
GCA_000379625_03181
Unannotated protein.
  
 
 0.913
GCA_000379625_03519
Unannotated protein.
 
 
 0.912
GCA_000379625_00369
Unannotated protein.
    
 0.885
GCA_000379625_00184
Unannotated protein.
  
  
 0.880
GCA_000379625_02382
Unannotated protein.
  
 0.767
GCA_000379625_04519
Unannotated protein.
    
  0.680
GCA_000379625_04387
Unannotated protein.
       0.673
Your Current Organism:
Actinomycetospora chiangmaiensis
NCBI taxonomy Id: 1120948
Other names: A. chiangmaiensis DSM 45062, Actinomycetospora chiangmaiensis DSM 45062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.