STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374325_00479Unannotated protein. (284 aa)    
Predicted Functional Partners:
GCA_000374325_00480
Unannotated protein.
 
  
 0.983
GCA_000374325_00481
Unannotated protein.
 
  
 0.881
GCA_000374325_00478
Unannotated protein.
  
  
 0.826
GCA_000374325_00597
Unannotated protein.
  
     0.762
GCA_000374325_00159
Unannotated protein.
  
     0.754
GCA_000374325_00929
Unannotated protein.
  
     0.753
GCA_000374325_01161
Unannotated protein.
  
     0.745
GCA_000374325_00153
Unannotated protein.
  
     0.734
GCA_000374325_01278
Unannotated protein.
  
     0.722
GCA_000374325_00263
Unannotated protein.
  
     0.719
Your Current Organism:
Allofustis seminis
NCBI taxonomy Id: 1120978
Other names: A. seminis DSM 15817, Allofustis seminis DSM 15817
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