STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES62368.1Stage V sporulation protein AC. (155 aa)    
Predicted Functional Partners:
SES62356.1
Stage V sporulation protein AD.
 
  
 0.992
SES62313.1
Stage V sporulation protein AF.
 
  
 0.956
SES62322.1
Stage V sporulation protein AE.
  
  
 0.894
SES62345.1
Stage V sporulation protein AE.
 
  
0.891
gpr
Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
  
 0.888
spoIIAB
Stage II sporulation protein AB (anti-sigma F factor); Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.
 
   
 0.882
SES67272.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
   
 0.816
SET18604.1
Putative DeoR family transcriptional regulator, stage III sporulation protein D.
  
   
 0.793
SES68104.1
Spore germination protein KA.
  
    0.786
SES94924.1
Spore germination protein.
  
    0.786
Your Current Organism:
Anaerobranca gottschalkii
NCBI taxonomy Id: 1120990
Other names: A. gottschalkii DSM 13577, Anaerobranca gottschalkii DSM 13577
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.